Publications
Gene expression profiles of bone marrow cells from mice phenotype-selected for maximal or minimal acute inflammations: searching for genes in acute inflammation modifier loci, Immunology 128(1): e562-71 (2009).
Evaluation of genes identified by microarray analysis in favorable neuroblastoma, Pediatr Surg Int. August 23 (Epub ahead of print) (2009).
Do sex steroids exert sex-specific and/or opposite effects on gene expression in lacrimal and meibomian glands, Mol Vis. (15): 1553-72 (2009).
Progressive obesity leads to altered ovarian gene expression in the Lethal Yellow mouse: a microarray study, J Ovarian Res. (2): 10 (2009).
Differential Expression of Pancreatitis-Associated Protein and Thrombospondins in Arterial versus Venous Tissues, J Vasc Res (46): 551-560 (2009).
Candidate genes for sensitivity and resistance of human glioblastoma multiforme cell lines to erlotinib. Laboratory investigation, J Neurosurg 111(2): 211-8 (2009).
Valproic acid-induced deregulation in vitro of genes associated in vivo with neural tube defects. Toxicol Sci. 108(1): 132-48 (2009).
Pathogenetic pathways leading to glioblastoma multiforme: association between gene expressions and resistance to erlotinib, Anticancer Res 28(6A): 3729-32 (2008).
Epidermal growth factor receptor pathway gene expressions and biological response of glioblastoma multiforme cell lines to erlotinib, Anticancer Res 28(6A): 3725-8 (2008).
The cerebral microvasculature in schizophrenia: a laser capture microdissection study, PLoS One 3(12): e3964 (2008).
Study of gene expression profile in liver transplant recipients with hepatitis C virus, Transplant Proc.40(9): 2971-4 (2008).
Gene expression profiling in liver transplant recipients with alcoholic cirrhosis, Transplant Proc. 40(9): 2955-8 (2008).
Advanced Genomic Data Mining, PLoS Computational Biology 4(9): e1000121 (2008).
MicroRNA expression profiling using microarrays, Nature Protocols 3(4): 563-578 (2008).
Two recombinant human interferon-beta 1a pharmaceutical preparations produce a similar transcriptional response determined using whole genome microarray analysis, International Journal of Clinical Pharmacology and Therapeutics 46(2): 64-71 (2008).
Thyroid hormone action in the adult brain: gene expression profiling of the effects of single and multiple doses of triiodo-L-thyronine in the rat striatum, Endocrinology 149(8): 3989-4000 (2008).
Wild-type and mutant alpha-synuclein induce a multi-component gene expression profile consistent with shared pathophysiology in different transgenic mouse models of PD, Experimental Neurology 204(1): 421-432 (2008).
Shared gene expression alterations in schizophrenia and bipolar disorder, Biological Psychiatry 64(2): 89-97 (2008).
Prediction of lymphatic metastasis based on gene expression profile analysis after brachytherapy for early-stage oral tongue carcinoma, Radiotherapy and oncology, Journal of the European Society for Therapeutic Radiology and Oncology 87(2): 237-242 (2008).
Gene Expression Profile of Ovalbumin-Induced Lung Inflammation in a Murine Model of Asthma, Journal of Investigational Allergology and Clinical Immunology 18(2): 106-112 (2008).
Differential gene expression analysis of a known hepatotoxin, N-acetyl-p-amino-phenol (APAP) as compared to its non-toxic analog, N-acetyl-m-amino-phenol (AMAP) in mouse liver, The Journal of Toxicological Sciences 33(2): 163-173 (2008).
The effect of cardiac ischemic preconditioning on rat left ventricular gene expression profile, Cell Biochemistry and Function 26(2): 179-184 (2008).
Codelink: an R package for analysis of GE healthcare gene expression bioarrays, Bioinformatics 23(9): 1168-1169 (2007).
Gene expression changes in peripheral blood mononuclear cells from multiple sclerosis patients undergoing beta-interferon therapy, Journal of the Neurological Sciences 258(1-2): 52-59 (2007).
The effects of estrogen and testosterone on gene expression in the rat mesenteric arteries, Vascular Pharmacology 47(4): 238-247 (2007).
Increased susceptibility of aging kidney to ischemic injury: identification of candidate genes changed during aging, but corrected by caloric restriction, American Journal of Physiology Renal Physiology 293(4): 1272-1281 (2007).
The radiation-induced cell-death signaling pathway is activated by concurrent use of cisplatin in sequential biopsy specimens from patients with cervical cancer, Cancer Biology & Therapy 6(6): 905-111 (2007).
Differentiating human embryonic stem cells express a unique housekeeping gene signature, Stem Cells 25(2): 473-480 (2007).
Altered T-cell function in schizophrenia: a cellular model to investigate molecular disease mechanisms, PLoS ONE 2(1): e692 (2007).
Toxicogenomic study of triazole fungicides and perfluoroalkyl acids in rat livers predicts toxicity and categorizes chemicals based on mechanisms of toxicity, Toxicological Sciences 97(2): 595-613 (2007).
Comparison of the global gene expression profiles produced by methylparaben, n-butylparaben and 17beta-oestradiol in MCF7 human breast cancer cells, Journal of Applied Toxicology 27(1): 67-77 (2007).
The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements, Nature Biotechnology 24: 1151-1161 (2006).
Rat toxicogenomic study reveals analytical consistency across microarray platforms, Nature Biotechnology 24: 1162-1169 (2006).
Hepatic gene expression response to acute indomethacin exposure, Molecular Diagnosis & Therapy 10(3): 187-196 (2006).
Gene array profiles of alcohol and aldehyde metabolizing enzymes in brains of C57BL/6 and DBA/2 mice, Alcoholism, Clinical & Experimental Research 30(10): 1659-1669 (2006).
Sex-related effect on gene expression in the mouse meibomian gland, Current Eye Research 31(2): 119-128 (2006).
Genetic or pharmacological inactivation of the dopamine D1 receptor differentially alters the expression of regulator of G-protein signalling (Rgs) transcripts, European Journal of Neuroscience 24(3): 806-818 (2006).
Evaluation of DNA microarray results with quantitative gene expression platforms, Nature Biotechnology 24: 115-1122 (2006).
Using RNA sample titrations to assess microarray platform performance and normalization techniques, Nature Biotechnology 24: 1123-1131 (2006).
Evaluation of external RNA controls for the assessment of microarray performance, Nature Biotechnology 24: 1132-1139 (2006).
Comparison of normalization methods for CodeLink Bioarray data, BMC Bioinformatics 6: 309 (2005).
Molecular dynamics of the compensatory response to myocardial infarct, Journal of Molecular & Cellular Cardiology 38(1): 103-117 (2005).
Endophyte-infected tall fescue diet alters gene expression in heifer luteal tissue as revealed by interspecies microarray analysis, Molecular Reproduction & Development 67: 154-161 (2004).
Chemopreventive n-3 polyunsaturated fatty acids reprogram genetic signatures during colon cancer initiation and progression in the rat, Cancer Research 64(18): 6797-6804 (2004).